Methods

Here, we describe methods that could be of more general use to the scientific community. Ranganathan Lab-specific protocols and information for lab members use are found in the internal part of this site. Specific information about the SCA method is given in a separate section, but this page does contain many useful scripts and protcols for facilitating this analysis.

I. SEQUENCE ANALYSIS

Construction of multiple sequence alignments
Alignments for download
SCA

II. CODES (coming soon....)

General MATLAB scripts and functions
SCA-based Protein Design methods

III. DROSOPHILA GENETICS - a primer

Mike Socolich's tutorial (PDF version)